RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1, RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1
dbSNP IDss475876870
SNP Array ID
480K SNP array for apple:AX-105215840
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1
20K SNP array for apple:RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1
50K SNP array for apple:AX-105215840
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1.probe: GAAACTTTGCTAAAGTTTATCATGCAAGAAACCTCCAAACTGGCCATAGC
5' Flanking SequenceGTTAGGGCAAGGAAACTTTGCTAAAGTTTATCATGCAAGAAACCTCCAAACTGGCCATAG C
3' Flanking SequenceTGGCGATTAAGGTAATTAACAAAGAAAAGGTTCTGAAAGTTGGACTAATTGATCAAACAA A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HCGA_F11N/A18.85SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
2Apple_HC64_F11N/A14.57SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
3Apple_HCMO_F11N/A42.15SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
4Apple_HGMM_Consenus1N/A48.29SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
5Apple-RosBREED-3.9K-20191N/A39.4SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
6Apple-BB-F11N/A45.61SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
7Apple-NC-F11N/A70.72SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
8Apple-NCZFBB-consensus1N/A46.8SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
9Apple-ZF-F11N/A50.13SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
10Apple-MM-F11N/A40.3a475876870View
11Apple-Honeycrisp_Consensus-F11N/A39.4RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1View
Sequence
>RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1 ID=RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1; Name=RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
TTTATCATGCAAGAAACCTCCAAACTGGCCATAGC[A/G]TGGCGATTAA
GGTAATTAACAAAGAAAAGGTTCTG