RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1, RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1
dbSNP IDss475879030
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1
50K SNP array for apple:AX-105185724
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTACTGCTATTGACCACGATAATATTTCGTTGAGCC
3' Flanking SequenceGGTTGATTCTTCAACAAGCACAGTTCTTTGCGATT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A45.9RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1View
2Apple-M432-2013-physical-Malus-domestica8N/A9698192RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1View
3Apple-BB-F15N/A37.29RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1View
4Apple-NC-F15N/A48.73RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1View
5Apple-NCZFBB-consensus5N/A39.67RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1View
6Apple-ZF-F15N/A39.76RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1View
7Apple-Honeycrisp_Consensus-F15N/A52.11RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1View
Sequence
>RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1 ID=RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1; Name=RosBREEDSNP_SNP_GA_9698192_Lg8_RosCOS2185_MAF40_MDP0000200579_exon1; organism=Malus x domestica; type=genetic_marker; length=71bp
TACTGCTATTGACCACGATAATATTTCGTTGAGCCRGGTTGATTCTTCAA
CAAGCACAGTTCTTTGCGATT
Alignments
Feature NameTypeLocationAnalysis
MDC011599.107 contig MDC011599.107:1373..1373. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:24581480..24581480. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation