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Marker Overview
| Name | RosBREEDSNP_SNP_AG_21721114_Lg13_02069_MAF30_1664580_exon1 |
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| dbSNP ID | ss475883842 |
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| SNP Array ID | | IRSC 9K SNP array for apple: | RosBREEDSNP_SNP_AG_21721114_Lg13_02069_MAF30_1664580_exon1 | | 50K SNP array for apple: | AX-105208553 |
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| Type | SNP |
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| SNP Alleles | A/G |
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| 5' Flanking Sequence | CTATACTTTATTTTTATCTTAGGTCATAGTGTAAC |
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| 3' Flanking Sequence | TTTAACAATTGAATTTGTAAGACTGTTTAGCAAT |
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| Species | Malus x domestica |
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| Publication | [view all] |
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| Contact | Nicola Harrison
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Analyses
This genetic_marker is derived from or has results from the following analyses
Publications
| Year | Publication |
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| 2013 | Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407. |
| 2016 | Harrison N, Harrison RJ, Barber-Perez N, Cascant-Lopez E, Cobo-Medina M, Lipska M, Conde-Ruíz R, Brain P, Gregory PJ, Fernández-Fernández F. A new three-locus model for rootstock-induced dwarfing in apple revealed by genetic mapping of root bark percentage. Journal of experimental botany. 2016 Jan 29; 67(6):1871-1881. |
| 2020 | Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8 |
Sequence
>RosBREEDSNP_SNP_AG_21721114_Lg13_02069_MAF30_1664580_exon1 ID=RosBREEDSNP_SNP_AG_21721114_Lg13_02069_MAF30_1664580_exon1; Name=RosBREEDSNP_SNP_AG_21721114_Lg13_02069_MAF30_1664580_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
CTATACTTTATTTTTATCTTAGGTCATAGTGTAACRTTTAACAATTGAAT
TTGTAAGACTGTTTAGCAAT
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