RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3, RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3
dbSNP IDss475878391
SNP Array ID
480K SNP array for apple:AX-105179467
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3
20K SNP array for apple:RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3
50K SNP array for apple:AX-105179467
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3.probe: TTCAAATTTCCAGAACTGGAACTGGTTTGTTTCTATCTCAGCACAAGTAT
5' Flanking SequenceTTTCCTGGGCATTCAAATTTCCAGAACTGGAACTGGTTTGTTTCTATCTCAGCACAAGTA T
3' Flanking SequenceTTCATGATTTACTGGTGAAAACAGAAATGGTTGATTCTAAACCTTGTGACACACCTTGTC T
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3 ID=RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3; Name=RosBREEDSNP_SNP_AG_24450804_Lg5_AT11_MAF40_MDP0000296015_exon3; organism=Malus x domestica; type=genetic_marker; length=75bp
CTGGAACTGGTTTGTTTCTATCTCAGCACAAGTAT[A/G]TTCATGATTT
ACTGGTGAAAACAGAAATGGTTGAT
Alignments
Feature NameTypeLocationAnalysis
MDC020989.438 contig MDC020989.438:5837..5837. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr12 chromosome Chr12:6013765..6013765. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation