RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1, RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1
dbSNP IDss475880030
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1
50K SNP array for apple:AX-105197752
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTGGAAACGCGTCCCTTCATCTTCTTGATCATCCGA
3' Flanking SequenceAACTTCAATTAATTTAGTAAGTTCTTCTTCCAGC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A5.9RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1View
2Apple-M432-2013-physical-Malus-domestica11N/A3433852RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1View
Sequence
>RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1 ID=RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1; Name=RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TGGAAACGCGTCCCTTCATCTTCTTGATCATCCGARAACTTCAATTAATT
TAGTAAGTTCTTCTTCCAGC
Alignments
Feature NameTypeLocationAnalysis
MDC018275.178 contig MDC018275.178:4485..4485. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:2664385..2664385. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation