RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1, RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1
dbSNP IDss475875793
SNP Array ID
480K SNP array for apple:AX-105182050
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1
20K SNP array for apple:RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1
50K SNP array for apple:AX-105182050
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1.probe: ACTGAATGTGTGGAGACCAATTCTACAACCCTTTTGCTGAAAGAATAAAA
5' Flanking SequenceAAAAAAGTAGGAAACTTAATAAGTGACTAGTATTACGGAGGAAAATCAGTATCGTTTTAT C
3' Flanking SequenceTTTTATTCTTTCAGCAAAAGGGTTGTAGAATTGGTCTCCACACATTCAGTCTGTTATTAA C
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HCGA_F11N/A23.77SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1View
2Apple_HC64_F11N/A20.97SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1View
3Apple_HCMO_F11N/A34.42SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1View
4Apple_HGMM_Consenus1N/A40.34SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1View
5Apple-RGTxGD-F1-2015RGT_1N/A35.6SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1View
6Apple-RosBREED-3.9K-20191N/A32.63SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1View
7Apple-MM-F11N/A34.8a475875793View
8apple-RosBREED-sweetness-2015LG1N/A92.7ss475875793View
9Apple-Honeycrisp_Consensus-F11N/A32.63RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1View
Sequence
>RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1 ID=RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1; Name=RosBREEDSNP_SNP_GA_35787897_Lg1_241489_MAF30_241489_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
CTAGTATTACGGAGGAAAATCAGTATCGTTTTATC[A/G]TTTTATTCTT
TCAGCAAAAGGGTTGTAGAATTGGT