RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1, RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1
Aliasss475876352
rs267609300
a475876352
SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1
AX-105176772
dbSNP IDss475876352
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGGTTGTCTCGCTACTTCCACAAAGACGATCCTTGC
3' Flanking SequenceGAATCTCTTTTGCATGGATACAAATTTGACAGGT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1 ID=RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1|Name=RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
GGTTGTCTCGCTACTTCCACAAAGACGATCCTTGCRGAATCTCTTTTGCA
TGGATACAAATTTGACAGGT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A41.31RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1View
2Apple-M432-2013-physical-Malus-domestica12N/A28378785RosBREEDSNP_SNP_AG_28378785_Lg12_12122_MAF40_12122_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC000847.571 contig MDC000847.571:11678..11678. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr08 chromosome Chr08:19333598..19333598. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:19333597..19333597. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation