RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3, RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3
dbSNP IDss475877392
SNP Array ID
480K SNP array for apple:AX-105223520
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3
20K SNP array for apple:RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3
50K SNP array for apple:AX-105223520
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3.probe: TTGTAACACCTTGGACATGTCTGATGCAGCTTGTTTTGTATTACGGGCAA
5' Flanking SequenceTGCTGCTCTTACTTATTTCTGGCGATTGAAAATGCCCGAGACAGCTCGGTACACCGCCCT T
3' Flanking SequenceTTGCCCGTAATACAAAACAAGCTGCATCAGACATGTCCAAGGTGTTACAAGTGAGTCTTG A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3 ID=RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3; Name=RosBREEDSNP_SNP_AG_35490042_Lg2_00267_MAF50_MDP0000189931_exon3; organism=Malus x domestica; type=genetic_marker; length=75bp
TGAAAATGCCCGAGACAGCTCGGTACACCGCCCTT[A/G]TTGCCCGTAA
TACAAAACAAGCTGCATCAGACATG
Alignments
Feature NameTypeLocationAnalysis
MDC008264.312 contig MDC008264.312:13424..13424. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:33424344..33424344- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation