RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1, RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1
Aliasss475879112
rs267612058
a475879112
SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1
AX-105176140
dbSNP IDss475879112
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTCTCACTTTCACTATCGCGCTTCCACTGCCTCACT
3' Flanking SequenceAAAAGGAAAAATGTTGGCAGCTAAAACCCTAATA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1 ID=RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1|Name=RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TCTCACTTTCACTATCGCGCTTCCACTGCCTCACTRAAAAGGAAAAATGT
TGGCAGCTAAAACCCTAATA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A38.69RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1View
2Apple-M432-2013-physical-Malus-domestica8N/A19611947RosBREEDSNP_SNP_GA_19611947_Lg8_00862_MAF20_522521_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC006155.85 contig MDC006155.85:2853..2853. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr08 chromosome Chr08:12798629..12798629. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:12798628..12798628. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation