RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2, RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2
dbSNP IDss475880111
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2
50K SNP array for apple:AX-105207289
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGGGTTCATCGCGACCTGGTTCTTGGCCGCATCGCC
3' Flanking SequenceATCAAACTTTCGGTGTCGGTAAAAGCCACAACAG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A35RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2View
2Apple-M432-2013-physical-Malus-domestica11N/A9904632RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2View
Sequence
>RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2 ID=RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2; Name=RosBREEDSNP_SNP_AG_9904632_Lg11_RosCOS3333_MAF40_MDP0000278972_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
GGGTTCATCGCGACCTGGTTCTTGGCCGCATCGCCRATCAAACTTTCGGT
GTCGGTAAAAGCCACAACAG
Alignments
Feature NameTypeLocationAnalysis
MDC007631.311 contig MDC007631.311:8281..8281. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr09 chromosome Chr09:13922509..13922509. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr09 chromosome Chr09:13922502..13922502. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation