RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2, RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2
dbSNP IDss475877753
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2
50K SNP array for apple:AX-105177566
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTTGTTGTATTCAATGTGCAGGAAAACAGCTGGTTC
3' Flanking SequenceGACAGAGAGCTCGAAGGAAGGAGGAAGAGAGTCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A49.2RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2View
2Apple-M432-2013-physical-Malus-domestica3N/A29883916RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2View
Sequence
>RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2 ID=RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2; Name=RosBREEDSNP_SNP_CT_29883916_Lg3_01604_MAF40_1685082_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
TTGTTGTATTCAATGTGCAGGAAAACAGCTGGTTCYGACAGAGAGCTCGA
AGGAAGGAGGAAGAGAGTCA
Alignments
Feature NameTypeLocationAnalysis
MDC007866.269 contig MDC007866.269:1448..1448. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:29313630..29313630. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation