RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1, RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1
Aliasss475880232
rs267613177
b475880232
SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1
AX-105196661
dbSNP IDss475880232
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1
50K SNP array for apple:RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGGGTGGGCACAAGCTCATTCTCTTCATTTTTACCA
3' Flanking SequenceAGTGACCCCAGACTTCTTAGGAACAACTTGAATC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1 ID=RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1|Name=RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
GGGTGGGCACAAGCTCATTCTCTTCATTTTTACCAYAGTGACCCCAGACT
TCTTAGGAACAACTTGAATC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A55.5RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1View
2Apple-M432-2013-physical-Malus-domestica11N/A28449600RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC012603.1108 contig MDC012603.1108:936..936. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr00 chromosome Chr00:41995309..41995309. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation