RosBREEDSNP_SNP_CT_29892800_Lg3_01604_MAF30_45189_exon1, RosBREEDSNP_SNP_CT_29892800_Lg3_01604_MAF30_45189_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_29892800_Lg3_01604_MAF30_45189_exon1
dbSNP IDss475877754
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_29892800_Lg3_01604_MAF30_45189_exon1
50K SNP array for apple:AX-105175096
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTATATCCTTTTCTTAGACCTTATAATGCTAATAAG
3' Flanking SequenceTGCAAGCAAGGTCTGCTCAATGTGTTTTCCTTGG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CT_29892800_Lg3_01604_MAF30_45189_exon1 ID=RosBREEDSNP_SNP_CT_29892800_Lg3_01604_MAF30_45189_exon1; Name=RosBREEDSNP_SNP_CT_29892800_Lg3_01604_MAF30_45189_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TATATCCTTTTCTTAGACCTTATAATGCTAATAAGYTGCAAGCAAGGTCT
GCTCAATGTGTTTTCCTTGG
Alignments
Feature NameTypeLocationAnalysis
MDC000179.390 contig MDC000179.390:91..91. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:28632113..28632113. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr15 chromosome Chr15:22437435..22437435. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation