RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1, RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1
Aliasss475878034
rs267610980
a475878034
SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1
AX-105201853
dbSNP IDss475878034
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1
50K SNP array for apple:RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTTTATGTTAAGCCTGTTTACTGAATTTATTGAATT
3' Flanking SequenceGTCTCGTGTTTTTGGTGAGGAAATAAATGTTAGC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1 ID=RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1|Name=RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TTTATGTTAAGCCTGTTTACTGAATTTATTGAATTYGTCTCGTGTTTTTG
GTGAGGAAATAAATGTTAGC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A52.05RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1View
2Apple-M432-2013-physical-Malus-domestica4N/A21182412RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC020101.37 contig MDC020101.37:2418..2418. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr04 chromosome Chr04:28292960..28292960. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr04 chromosome Chr04:29866267..29866267. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation