RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1, RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1
dbSNP IDss475878034
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1
50K SNP array for apple:AX-105201853
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTTTATGTTAAGCCTGTTTACTGAATTTATTGAATT
3' Flanking SequenceGTCTCGTGTTTTTGGTGAGGAAATAAATGTTAGC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A52.05RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1View
2Apple-M432-2013-physical-Malus-domestica4N/A21182412RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1View
Sequence
>RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1 ID=RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1; Name=RosBREEDSNP_SNP_CT_21182412_Lg4_01236_MAF10_392737_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TTTATGTTAAGCCTGTTTACTGAATTTATTGAATTYGTCTCGTGTTTTTG
GTGAGGAAATAAATGTTAGC
Alignments
Feature NameTypeLocationAnalysis
MDC020101.37 contig MDC020101.37:2418..2418. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr04 chromosome Chr04:28292960..28292960. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr04 chromosome Chr04:29866267..29866267. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation