RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1, RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1
dbSNP IDss475875796
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1
50K SNP array for apple:AX-105215035
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCCTCTTCAAACGATTCCTGCTCTTGTTCCCTCTCA
3' Flanking SequenceGCGAGAATTCCTTCTTTTCAATCTTGCAGCTCTC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A59.67RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1View
2Apple-M432-2013-physical-Malus-domestica1N/A35939914RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1View
Sequence
>RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1 ID=RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1; Name=RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
CCTCTTCAAACGATTCCTGCTCTTGTTCCCTCTCARGCGAGAATTCCTTC
TTTTCAATCTTGCAGCTCTC
Alignments
Feature NameTypeLocationAnalysis
MDC018853.27 contig MDC018853.27:1422..1422. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:32471742..32471742. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr01 chromosome Chr01:32458031..32458031. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation