RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1, RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1
Aliasss475877155
rs267610102
b475877155
SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1
AX-105224257
dbSNP IDss475877155
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAAAGATCCAGTCAGGGCTGGCCTCACACCAATTCT
3' Flanking SequenceGAAAGGCCTGAAGGGAACCTGAAGGGTGGAGCCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1 ID=RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1|Name=RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
AAAGATCCAGTCAGGGCTGGCCTCACACCAATTCTRGAAAGGCCTGAAGG
GAACCTGAAGGGTGGAGCCA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20132N/A22.9RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1View
2Apple-M432-2013-physical-Malus-domestica2N/A10695663RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1View
3Apple-BB-F12N/A26.3RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1View
4Apple-NC-F12N/A15.52RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1View
5Apple-NCZFBB-consensus2N/A21.34RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1View
6Apple-ZF-F12N/A16.1RosBREEDSNP_SNP_GA_10695663_Lg2_01223_MAF50_265612_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC009672.179 contig MDC009672.179:17652..17652. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:9312962..9312962. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr02 chromosome Chr02:9312961..9312961. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation