RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1, RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1
dbSNP IDss475878475
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1
50K SNP array for apple:AX-105206816
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTTCTAACTCTTGTCTCATCGCTCGACTGTACTCGG
3' Flanking SequenceATTGAACAAACTACTTTGTTCAATTACTCGCAAC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A69RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1View
2Apple-M432-2013-physical-Malus-domestica5N/A37417867RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1View
3Apple-NCZFBB-consensus5N/A0RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1View
4Apple-ZF-F15N/A0.58RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1View
Sequence
>RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1 ID=RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1; Name=RosBREEDSNP_SNP_TC_37417867_Lg5_02674_MAF40_MDP0000396187_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TTCTAACTCTTGTCTCATCGCTCGACTGTACTCGGYATTGAACAAACTAC
TTTGTTCAATTACTCGCAAC
Alignments
Feature NameTypeLocationAnalysis
MDC007265.136 contig MDC007265.136:7240..7240. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:237670..237670. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr05 chromosome Chr05:237668..237668. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation