RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1, RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1
Aliasss475879714
rs267612660
a475879714
SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1
AX-105217156
dbSNP IDss475879714
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGAGTGCCTTCCAATTCAGTTCCACAAACGCCATAT
3' Flanking SequenceAGATATGGCATGGCAAAAAGAACAAATCTTAATC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1 ID=RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1|Name=RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
GAGTGCCTTCCAATTCAGTTCCACAAACGCCATATRAGATATGGCATGGC
AAAAAGAACAAATCTTAATC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A37.53RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1View
2Apple-M432-2013-physical-Malus-domestica10N/A13058388RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC010150.213 contig MDC010150.213:33561..33561. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:21343660..21343660. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation