RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2, RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2
Aliasss475880274
rs267613219
a475880274
SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2
AX-105177771
dbSNP IDss475880274
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2
50K SNP array for apple:RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTCCTCATCTTCTTTATTTTGAACTCATACCTCTCT
3' Flanking SequenceTCCTCTTCGCAAGCTCGAACCCCAAATCTTGAAC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2 ID=RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2|Name=RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2|organism=Malus x domestica|type=genetic_marker|length=70bp
TCCTCATCTTCTTTATTTTGAACTCATACCTCTCTYTCCTCTTCGCAAGC
TCGAACCCCAAATCTTGAAC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A61RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2View
2Apple-M432-2013-physical-Malus-domestica11N/A32999468RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2View
Alignments
Feature NameTypeLocationAnalysis
MDC000760.256 contig MDC000760.256:40548..40548. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:36440442..36440442. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr11 chromosome Chr11:36440441..36440441. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation