RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1, RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1
Aliasss475877756
rs267610702
a475877756
SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1
AX-105193864
dbSNP IDss475877756
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceACTGGGGCTAACAACTGTAAGTTCATCGTATCAAC
3' Flanking SequenceATATGAACAACATCGACAACATGTCCTCATTTAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1 ID=RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1|Name=RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
ACTGGGGCTAACAACTGTAAGTTCATCGTATCAACRATATGAACAACATC
GACAACATGTCCTCATTTAA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A49.2RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A29943637RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC016527.225 contig MDC016527.225:4383..4383. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:29381171..29381171. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:29381170..29381170. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation