RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1, RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1
dbSNP IDss475877756
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1
50K SNP array for apple:AX-105193864
TypeSNP
SNP AllelesA/G
5' Flanking SequenceACTGGGGCTAACAACTGTAAGTTCATCGTATCAAC
3' Flanking SequenceATATGAACAACATCGACAACATGTCCTCATTTAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A49.2RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A29943637RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1View
Sequence
>RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1 ID=RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1; Name=RosBREEDSNP_SNP_AG_29943637_Lg3_01937_MAF50_789497_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
ACTGGGGCTAACAACTGTAAGTTCATCGTATCAACRATATGAACAACATC
GACAACATGTCCTCATTTAA
Alignments
Feature NameTypeLocationAnalysis
MDC016527.225 contig MDC016527.225:4383..4383. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:29381170..29381170. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation