RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1, RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1
dbSNP IDss475881514
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1
50K SNP array for apple:AX-105202202
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGAAAACTACCCACTAAGTTGATTGGCCGAACTTTT
3' Flanking SequenceGTCTTTGAAATTGTTAAGTATCATGGTGTTCCAG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201310N/A35.97RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1View
2Apple-M432-2013-physical-Malus-domestica15N/A25209921RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1View
Sequence
>RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1 ID=RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1; Name=RosBREEDSNP_SNP_CT_25209921_Lg15_RosCOS588_MAF30_MDP0000689709_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
GAAAACTACCCACTAAGTTGATTGGCCGAACTTTTYGTCTTTGAAATTGT
TAAGTATCATGGTGTTCCAG
Alignments
Feature NameTypeLocationAnalysis
MDC017040.242 contig MDC017040.242:1759..1759. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:16056061..16056061. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation