RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1, RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1
dbSNP IDss475875998
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1
50K SNP array for apple:AX-105198273
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGTGTGGTCGGTGGTGCGGCGCTTTGACCAGCCCCA
3' Flanking SequenceGCCTACAAGCACTTCATCCGGAGCTGTAACGTCGA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20136N/A32.39RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1View
2Apple-M432-2013-physical-Malus-domestica6N/A4870027RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1View
3Apple-BB-F16N/A10.47RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1View
4Apple-NC-F16N/A15.57RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1View
5Apple-NCZFBB-consensus6N/A10.47RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1View
6Apple-ZF-F16N/A5.93RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1View
Sequence
>RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1 ID=RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1; Name=RosBREEDSNP_SNP_GA_4870027_Lg6_325347_MAF40_325347_exon1; organism=Malus x domestica; type=genetic_marker; length=71bp
GTGTGGTCGGTGGTGCGGCGCTTTGACCAGCCCCARGCCTACAAGCACTT
CATCCGGAGCTGTAACGTCGA
Alignments
Feature NameTypeLocationAnalysis
MDC010871.392 contig MDC010871.392:6436..6436. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:4204026..4204026. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation