RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1, RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1
Aliasss475881555
rs267614500
c475881555
SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1
AX-105208285
dbSNP IDss475881555
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1
TypeSNP
SNP AllelesT/G
5' Flanking SequenceGTCGCATCTCTGCAGTACAACTATCTGTCCAACTT
3' Flanking SequenceCCGCCAACTATTTCCATCCGAAATAACAGTCTAAG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1Malus x domesticamarker_locus
RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1-72.59Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1 ID=RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1|Name=RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1|organism=Malus x domestica|type=genetic_marker|length=71bp
GTCGCATCTCTGCAGTACAACTATCTGTCCAACTTKCCGCCAACTATTTC
CATCCGAAATAACAGTCTAAG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A3.4RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1View
2Apple-M432-2013-physical-Malus-domestica15N/A30914007RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1View
3Pear-PH-CG-2017LG11N/A72.59RosBREEDSNP_SNP_GT_30914007_Lg15_RosCOS444_MAF30_MDP0000611785_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC018542.324 contig MDC018542.324:8511..8511. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr00 chromosome Chr00:16405486..16405486. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr11 chromosome Chr11:1439974..1439974. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation