RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1, RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1
dbSNP IDss475878238
SNP Array ID
480K SNP array for apple:AX-105180490
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1
50K SNP array for apple:AX-105180490
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1.probe: TTACAAGCCTTGTTAGAGCGGCCGAAGAACGATATCTTCGGAGCACTTCT
5' Flanking SequenceGGCGATGGCTTTGGGTCGTCGGTGCGTTGATCGCGGTCTTCGTTGCCGTTGCATTGACTT C
3' Flanking SequenceAGAAGTGCTCCGAAGATATCGTTCTTCGGCCGCTCTAACAAGGCTTGTAATTGTTCTCAG G
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-Honeycrisp_Consensus-F15N/A12.11RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1View
2Apple-RosBREED-3.9K-20195N/A68.8RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1View
3Apple-BB-F15N/A63.64RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1View
4Apple-NC-F15N/A101.26RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1View
5Apple-NCZFBB-consensus5N/A72.97RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1View
6Apple-ZF-F15N/A74.97RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1View
7Apple-consensus-Allard-2016LG5N/A20RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1View
Sequence
>RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1 ID=RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1; Name=RosBREEDSNP_SNP_CT_8345524_Lg5_01208_MAF30_973835_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
TTGATCGCGGTCTTCGTTGCCGTTGCATTGACTTC[C/T]AGAAGTGCTC
CGAAGATATCGTTCTTCGGCCGCTC