RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2, RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:

RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2

Type

SNP

SNP Alleles

A/G

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M432-2013	9	N/A	55.44	RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2	View
2	Apple-M432-2013-physical-Malus-domestica	9	N/A	29781241	RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2	View
3	Apple-RosBREED-3.9K-2019	9	N/A	50.11	RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2	View

Alignments

Feature Name	Type	Location	Analysis
MDC026996.21	contig	MDC026996.21:3797..3797.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr09	chromosome	Chr09:29414123..29414123.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation