RosBREEDSNP_SNP_TC_23874348_Lg8_RosCOS3331_MAF10_1651519_exon2, RosBREEDSNP_SNP_TC_23874348_Lg8_RosCOS3331_MAF10_1651519_exon2 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_TC_23874348_Lg8_RosCOS3331_MAF10_1651519_exon2

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:

RosBREEDSNP_SNP_TC_23874348_Lg8_RosCOS3331_MAF10_1651519_exon2

Type

SNP

SNP Alleles

T/C

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M432-2013	16	N/A	35.01	RosBREEDSNP_SNP_TC_23874348_Lg8_RosCOS3331_MAF10_1651519_exon2	View
2	Apple-M432-2013-physical-Malus-domestica	8	N/A	23874348	RosBREEDSNP_SNP_TC_23874348_Lg8_RosCOS3331_MAF10_1651519_exon2	View

Alignments

Feature Name	Type	Location	Analysis
MDC007837.354	contig	MDC007837.354:13239..13239.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr16	chromosome	Chr16:10326070..10326070.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation