RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2, RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2
dbSNP IDss475880717
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2
50K SNP array for apple:AX-105203475
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTCTCTTCTTCTTCTCCTTCTAGCACGCACGAAATG
3' Flanking SequenceGTCCAGCACAACCATCATCCAATATCGAATTGCT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20132N/A43.1RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2View
2Apple-M432-2013-physical-Malus-domestica13N/A3825745RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2View
Sequence
>RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2 ID=RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2; Name=RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
TCTCTTCTTCTTCTCCTTCTAGCACGCACGAAATGYGTCCAGCACAACCA
TCATCCAATATCGAATTGCT
Alignments
Feature NameTypeLocationAnalysis
MDC018761.194 contig MDC018761.194:9476..9476. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:40748119..40748119. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr10 chromosome Chr10:3099753..3099753. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr13 chromosome Chr13:4249566..4249566. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation