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Marker Overview
| Name | RosBREEDSNP_SNP_AG_20502979_Lg16_01237_MAF40_MDP0000185320_exon4 |
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| dbSNP ID | ss475881917 |
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| SNP Array ID | | 480K SNP array for apple: | AX-115182241 | | IRSC 9K SNP array for apple: | RosBREEDSNP_SNP_AG_20502979_Lg16_01237_MAF40_MDP0000185320_exon4 | | 50K SNP array for apple: | AX-105222474 |
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| Type | SNP |
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| SNP Alleles | R |
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| 5' Flanking Sequence | CTCTTATTTCAGGACGACGACATCGAAGAAATCCC |
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| 3' Flanking Sequence | CTAACAAGTTGCCCTCGACCAACTAAACCTCCTA |
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| Species | Malus x domestica |
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| Publication | [view all] |
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Analyses
This genetic_marker is derived from or has results from the following analyses
Publications
| Year | Publication |
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| 2013 | Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407. |
| 2020 | Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8 |
Sequence
>RosBREEDSNP_SNP_AG_20502979_Lg16_01237_MAF40_MDP0000185320_exon4 ID=RosBREEDSNP_SNP_AG_20502979_Lg16_01237_MAF40_MDP0000185320_exon4; Name=RosBREEDSNP_SNP_AG_20502979_Lg16_01237_MAF40_MDP0000185320_exon4; organism=Malus x domestica; type=genetic_marker; length=75bp
CTCTTATTTCAGGACGACGACATCGAAGAAATCCC[A/G]CTAACAAGTT
GCCCTCGACCAACTAAACCTCCTAC
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