RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1, RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1
Aliasss475876102
rs267609052
c475876102
SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1
AX-105185319
dbSNP IDss475876102
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1
50K SNP array for apple:RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGCTGATGATATAAATATTGCATCAGCCTACGAGCA
3' Flanking SequenceATACACCACCATCATAGGGACGCTTAATGGAAGA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1 ID=RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1|Name=RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
GCTGATGATATAAATATTGCATCAGCCTACGAGCAYATACACCACCATCA
TAGGGACGCTTAATGGAAGA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20132N/A22.8RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1View
2Apple-M432-2013-physical-Malus-domestica7N/A28093574RosBREEDSNP_SNP_CT_28093574_Lg7_135556_MAF30_135556_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC010662.110 contig MDC010662.110:108502..108502. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr07 chromosome Chr07:33338989..33338989. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr07 chromosome Chr07:33338988..33338988. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation