RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1, RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1
dbSNP IDss475877960
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1
50K SNP array for apple:AX-105177286
TypeSNP
SNP AllelesT/G
5' Flanking SequenceCTAGTTTCCTATCATCCGAATGGGTTTTCTCCGCC
3' Flanking SequenceCTTCATCACCGTTCTCACTGGTGCAATCCGGCGCC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20134N/A37.74RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1View
2Apple-M432-2013-physical-Malus-domestica4N/A16060029RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1View
3Apple-BB-F14N/A44.35RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1View
4Apple-NC-F14N/A47.14RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1View
5Apple-NCZFBB-consensus4N/A44.18RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1View
6Apple-ZF-F14N/A49.78RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1View
7Apple-Honeycrisp_Consensus-F14N/A32.72RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1View
Sequence
>RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1 ID=RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1; Name=RosBREEDSNP_SNP_GT_16060029_Lg4_01777_MAF30_MDP0000922741_exon1; organism=Malus x domestica; type=genetic_marker; length=71bp
CTAGTTTCCTATCATCCGAATGGGTTTTCTCCGCCKCTTCATCACCGTTC
TCACTGGTGCAATCCGGCGCC
Alignments
Feature NameTypeLocationAnalysis
MDC002669.26 contig MDC002669.26:34847..34847. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr04 chromosome Chr04:22749617..22749617. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation