RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1, RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1
dbSNP IDss475879120
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1
50K SNP array for apple:AX-105190368
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGATAAATAATTATCAGGATGCGATGGCCATATGCC
3' Flanking SequenceTCACTTTGGAAATCCTGATTTATTTATCACTTTC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A37.2RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1View
2Apple-M432-2013-physical-Malus-domestica8N/A20021703RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1View
Sequence
>RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1 ID=RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1; Name=RosBREEDSNP_SNP_GA_20021703_Lg8_00311_MAF10_MDP0000248297_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
GATAAATAATTATCAGGATGCGATGGCCATATGCCRTCACTTTGGAAATC
CTGATTTATTTATCACTTTC
Alignments
Feature NameTypeLocationAnalysis
MDC021404.479 contig MDC021404.479:6303..6303. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:34335331..34335331. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr02 chromosome Chr02:34350488..34350488. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr02 chromosome Chr02:37573065..37573065. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:24740189..24740189. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:14303057..14303057. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr11 chromosome Chr11:3348276..3348276. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation