RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3, RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3
dbSNP IDss475883379
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3
50K SNP array for apple:AX-105223358
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCCTTCATTTTGTTGACAACAACATTCATATGCATC
3' Flanking SequenceGCTCTCCCAGGGATATTGCAGAGCATGCGAGTCC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201312N/A16.8RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3View
2Apple-M432-2013-physical-Malus-domestica4N/A13297391RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3View
Sequence
>RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3 ID=RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3; Name=RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3; organism=Malus x domestica; type=genetic_marker; length=70bp
CCTTCATTTTGTTGACAACAACATTCATATGCATCYGCTCTCCCAGGGAT
ATTGCAGAGCATGCGAGTCC
Alignments
Feature NameTypeLocationAnalysis
MDC010674.335 contig MDC010674.335:8555..8555. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr04 chromosome Chr04:20511275..20511275. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation