RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2, RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2
dbSNP IDss475875962
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2
50K SNP array for apple:AX-105183235
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTTTCCCGGTCGGCGGACAGCACGGAGCTGGTGGAG
3' Flanking SequenceTGAAGGCGCGGAGTCATCACGAGATGAAGAAGAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A19.8RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2View
2Apple-M432-2013-physical-Malus-domestica5N/A14442489RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2View
Sequence
>RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2 ID=RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2; Name=RosBREEDSNP_SNP_GT_14442489_Lg5_245169_MAF30_245169_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
TTTCCCGGTCGGCGGACAGCACGGAGCTGGTGGAGKTGAAGGCGCGGAGT
CATCACGAGATGAAGAAGAA
Alignments
Feature NameTypeLocationAnalysis
MDC000368.238 contig MDC000368.238:36998..36998. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:40931647..40931647. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr05 chromosome Chr05:40931645..40931645. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation