RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2, RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2
dbSNP IDss475877601
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2
50K SNP array for apple:AX-105218396
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTGCTCAGTTTAGAAGAGCCAAAGGAAGGTTCGATT
3' Flanking SequenceGCCTGATGTTGAGCTCTATGAAGATCTCTTGTCC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A26.2RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2View
2Apple-M432-2013-physical-Malus-domestica3N/A9499478RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2View
Sequence
>RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2 ID=RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2; Name=RosBREEDSNP_SNP_CT_9499478_Lg3_02195_MAF40_256975_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
TGCTCAGTTTAGAAGAGCCAAAGGAAGGTTCGATTYGCCTGATGTTGAGC
TCTATGAAGATCTCTTGTCC
Alignments
Feature NameTypeLocationAnalysis
MDC012039.280 contig MDC012039.280:43637..43637. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:8174749..8174749. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation