RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1, RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1
Aliasss475877841
rs267610787
c475877841
SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1
AX-105181091
dbSNP IDss475877841
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTAACCTTTGTATTGCTCGTTTCTCAGGTATCTTAA
3' Flanking SequenceTACTTGACGAAGAAGTACTTGAAGAAGCACAACG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1 ID=RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1|Name=RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TAACCTTTGTATTGCTCGTTTCTCAGGTATCTTAARTACTTGACGAAGAA
GTACTTGAAGAAGCACAACG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A81.3RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A38444510RosBREEDSNP_SNP_AG_38444510_Lg3_00319_MAF40_530902_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC012661.300 contig MDC012661.300:344..344. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:36721563..36721563. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:36721562..36721562. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation