RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1, RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1
dbSNP IDss475880361
SNP Array ID
480K SNP array for apple:AX-105218047
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1
20K SNP array for apple:RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1
50K SNP array for apple:AX-105218047
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1.probe: CGCGAAGCCATGAAAACCGAGGCCACAACAGAAGCATTTAAAGAGATGCA
5' Flanking SequenceTTGAAGGCAGGCGCGAAGCCATGAAAACCGAGGCCACAACAGAAGCATTTAAAGAGATGC A
3' Flanking SequenceCTTGTCAATGTCGGATTGTTTGGGGCCCCAAGAGTTCTTATGGTGGACCCAAAGTAGTCA T
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-MM-F112N/A1.3c475880361View
2Apple-Honeycrisp_Consensus-F112N/A2.42RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1View
3Apple-BB-F112N/A0.78RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1View
4Apple-NC-F112N/A2.86RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1View
5Apple-NCZFBB-consensus12N/A1.2RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1View
6Apple-ZF-F112N/A3.2RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1View
7Apple-consensus-Allard-2016LG12N/A3.02RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1View
Sequence
>RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1 ID=RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1; Name=RosBREEDSNP_SNP_GA_1240623_Lg12_RosCOS3293_MAF40_1686868_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
ACCGAGGCCACAACAGAAGCATTTAAAGAGATGCA[A/G]CTTGTCAATG
TCGGATTGTTTGGGGCCCCAAGAGT