RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1, RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1
dbSNP IDss475878523
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1
50K SNP array for apple:AX-105196804
TypeSNP
SNP AllelesA/C
5' Flanking SequenceCAAGATCATAACATCAAGAGCTTTCTTAATTTGTT
3' Flanking SequenceTAGTTCTTTCTCTCTAAATGCATCACGACGCTTA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20136N/A33.03RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1View
2Apple-M432-2013-physical-Malus-domestica6N/A5180646RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1View
3Apple-Honeycrisp_Consensus-F16N/A12.27RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1View
Sequence
>RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1 ID=RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1; Name=RosBREEDSNP_SNP_CA_5180646_Lg6_00082_MAF40_MDP0000693038_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
CAAGATCATAACATCAAGAGCTTTCTTAATTTGTTMTAGTTCTTTCTCTC
TAAATGCATCACGACGCTTA
Alignments
Feature NameTypeLocationAnalysis
MDC003588.481 contig MDC003588.481:43736..43736. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:4485944..4485944. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation