RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1, RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1
dbSNP IDss475880761
SNP Array ID
480K SNP array for apple:AX-105192016
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1
50K SNP array for apple:AX-105192016
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1.probe: CAGCTGCTTCGATGAAATGGATAAAGGAATTGTGCACTGGGTAGAACGTC
5' Flanking SequenceCATAAATGAAACATTGTAGAAGCTGTGGAGAGGATGACAGGCTACTCACTTTCTTGGATG G
3' Flanking SequenceGACGTTCTACCCAGTGCACAATTCCTTTATCCATTTCATCGAAGCAGCTGTCAATTTGAG A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Pear-PM-F1-Moonglow13N/A15.8RosBREED_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
2Pear-PH-CG-2017LG13N/A25.78RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
3Apple-RosBREED-3.9K-201913N/A23.39RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
4Apple-BB-F113N/A29.81RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
5Apple-NC-F113N/A38.69RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
6Apple-NCZFBB-consensus13N/A31.17RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
7Apple-ZF-F113N/A30RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
8Apple-consensus-Allard-2016LG13N/A23.12RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1View
Sequence
>RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1 ID=RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1; Name=RosBREEDSNP_SNP_CT_7165677_Lg13_00128_MAF20_1662884_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
GGAGAGGATGACAGGCTACTCACTTTCTTGGATGG[C/T]GACGTTCTAC
CCAGTGCACAATTCCTTTATCCATT