RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1, RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1
dbSNP IDss475875765
SNP Array ID
480K SNP array for apple:AX-105204318
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1
20K SNP array for apple:RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1
50K SNP array for apple:AX-105204318
TypeSNP
SNP AllelesA/C
Probe 1RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1.probe: GAGTGGCTTCCCTTTTCATTGAGCAAGCTGAAATCGTGGGGATTGAATCT
5' Flanking SequenceCAACGACCCTCGAGTGGCTTCCCTTTTCATTGAGCAAGCTGAAATCGTGGGGATTGAATC T
3' Flanking SequenceCCAGAGATGAGCTGACTGGTTTGTTGGTAGAAGAAGCACCAAGACGTAAAGTGATATCAG T
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HCGA_F11N/A13.15SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1View
2Apple_HC64_F11N/A10.95SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1View
3Apple_HCMO_F11N/A44.65SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1View
4Apple_HGMM_Consenus1N/A53.44SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1View
5Apple-MM-F11N/A49.9b475875765View
6Apple-Honeycrisp_Consensus-F11N/A45.95RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1View
7Pear-PH-CG-2017LG1N/A89.37RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1View
Sequence
>RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1 ID=RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1; Name=RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
TCATTGAGCAAGCTGAAATCGTGGGGATTGAATCT[A/C]CCAGAGATGA
GCTGACTGGTTTGTTGGTAGAAGAA