RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1, RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1
dbSNP IDss475876244
SNP Array ID
480K SNP array for apple:AX-105217086
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1
20K SNP array for apple:RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1
50K SNP array for apple:AX-105217086
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1.probe: ATGCACAAAAACAACCACACATGCCTTACCCATTTAGATAGCCATTTGTA
5' Flanking SequenceAGGGGAGTGTGCAAAGTCAAGCCAAGTTTATTGAGCATTTAAGATAGATGTATAAACATG G
3' Flanking SequenceTACAAATGGCTATCTAAATGGGTAAGGCATGTGTGGTTGTTTTTGTGCATTCATATGTTT A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1 ID=RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1; Name=RosBREEDSNP_SNP_AG_36033324_Lg10_186429_MAF30_186429_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
TTTATTGAGCATTTAAGATAGATGTATAAACATGG[A/G]TACAAATGGC
TATCTAAATGGGTAAGGCATGTGTG
Alignments
Feature NameTypeLocationAnalysis
MDC018675.230 contig MDC018675.230:1582..1582. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:34207997..34207997+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr10 chromosome Chr10:34207999..34207999. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation