RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6, RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6
dbSNP IDss475881562
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6
50K SNP array for apple:AX-105222623
TypeSNP
SNP AllelesT/G
5' Flanking SequenceGAATGTGGATGCTCTATCTGCAACAAAGGGATCTC
3' Flanking SequenceTGCTTCATGGGCTTGGAGTAGTCTTCTTGAGGGT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A3.2RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6View
2Apple-M432-2013-physical-Malus-domestica15N/A30978430RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6View
Sequence
>RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6 ID=RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6; Name=RosBREEDSNP_SNP_GT_30978430_Lg15_RosCOS444_MAF10_MDP0000263390_exon6; organism=Malus x domestica; type=genetic_marker; length=70bp
GAATGTGGATGCTCTATCTGCAACAAAGGGATCTCKTGCTTCATGGGCTT
GGAGTAGTCTTCTTGAGGGT
Alignments
Feature NameTypeLocationAnalysis
MDC011442.329 contig MDC011442.329:2482..2482. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:1375501..1375501. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr11 chromosome Chr11:1375499..1375499. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation