RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1, RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1
dbSNP IDss475883069
SNP Array ID
480K SNP array for apple:AX-105174372
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1
50K SNP array for apple:AX-105174372
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1.probe: CCCTAATTTTTATTACGTGTGAAAAATTTATACTAATTTTTCGGCGCATG
5' Flanking SequenceTATGTAATTTACCCTAATTTTTATTACGTGTGAAAAATTTATACTAATTTTTCGGCGCAT G
3' Flanking SequenceTGAACCGTTAAATCTATTAGCGTATGATTATGTAATTTGGAAAATTTGGATTTTTAGTTT A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HCGA_F11N/A9.06SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1View
2Apple_HC64_F11N/A7.33SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1View
3Apple_HCMO_F11N/A45.9SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1View
4Apple_HGMM_Consenus1N/A59.03SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1View
5Apple-MM-F11N/A52.3a475883069View
6Apple-Honeycrisp_Consensus-F11N/A47.82RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1View
Sequence
>RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1 ID=RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1; Name=RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
CGTGTGAAAAATTTATACTAATTTTTCGGCGCATG[C/T]TGAACCGTTA
AATCTATTAGCGTATGATTATGTAA