RosBREEDSNP_SNP_GA_826847_Lg4_01597_MAF50_175965_exon1, RosBREEDSNP_SNP_GA_826847_Lg4_01597_MAF50_175965_exon1 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_GA_826847_Lg4_01597_MAF50_175965_exon1

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:

RosBREEDSNP_SNP_GA_826847_Lg4_01597_MAF50_175965_exon1

Type

SNP

SNP Alleles

A/G

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M432-2013	13	N/A	63.73	RosBREEDSNP_SNP_GA_826847_Lg4_01597_MAF50_175965_exon1	View
2	Apple-M432-2013-physical-Malus-domestica	4	N/A	826847	RosBREEDSNP_SNP_GA_826847_Lg4_01597_MAF50_175965_exon1	View

Alignments

Feature Name	Type	Location	Analysis
MDC017867.146	contig	MDC017867.146:1612..1612.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr04	chromosome	Chr04:5246529..5246529.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation