RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2, RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2
dbSNP IDss475878805
SNP Array ID
480K SNP array for apple:AX-115182414
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2
20K SNP array for apple:RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2
50K SNP array for apple:AX-105199611
TypeSNP
SNP AllelesT/G
Probe 1RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2.probe: GCATCAAAGAAGACATCAAATCCATTGAGGTTCTTGACATTGGGAGTCGT
5' Flanking SequenceACATGGATCACCTGTAGTGATTTGAGGCGCTTAGAAAAGTTAGAAAGAGCTTCTTTGTAG T
3' Flanking SequenceACGACTCCCAATGTCAAGAACCTCAATGGATTTGATGTCTTCTTTGATGCCGTTCATGAT G
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-MM-F17N/A10.1b475878805View
Sequence
>RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2 ID=RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2; Name=RosBREEDSNP_SNP_CA_5805626_Lg7_00658_MAF40_453225_exon2; organism=Malus x domestica; type=genetic_marker; length=75bp
GCGCTTAGAAAAGTTAGAAAGAGCTTCTTTGTAGT[A/C]ACGACTCCCA
ATGTCAAGAACCTCAATGGATTTGA
Alignments
Feature NameTypeLocationAnalysis
MDC010201.200 contig MDC010201.200:708..708. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr07 chromosome Chr07:5510653..5510653- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr07 chromosome Chr07:5485184..5485184- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation