RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1, RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1
Aliasss475880923
rs267613868
b475880923
SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1
AX-105198920
dbSNP IDss475880923
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTATAACCTTCCAACACTGCCCCTCAAGCTGGATC
3' Flanking SequenceAGGGGATCCCTTGAGCCAAGCTTGGAAAGAATGC
SpeciesMalus x domestica
PolymorphismP_ RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1 ID=RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1|Name=RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TTATAACCTTCCAACACTGCCCCTCAAGCTGGATCRAGGGGATCCCTTGA
GCCAAGCTTGGAAAGAATGC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A48.79RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1View
2Apple-M432-2013-physical-Malus-domestica13N/A25477462RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC012378.381 contig MDC012378.381:8473..8473. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr08 chromosome Chr08:22804877..22804877. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:22804876..22804876. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation