RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1, RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1
dbSNP IDss475877726
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1
50K SNP array for apple:AX-105200430
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTGGTGATTGTGCTTGGGGTGGAATTGGTGGTTCG
3' Flanking SequenceGTTGTGGTGGAGTTGGTGGTTGGGATTGGGTTTG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201310N/A93.09RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A27691074RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1View
3Pear-PH-CG-2017LG3N/A92.81RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1View
Sequence
>RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1 ID=RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1; Name=RosBREEDSNP_SNP_GA_27691074_Lg3_00607_MAF50_380398_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TTGGTGATTGTGCTTGGGGTGGAATTGGTGGTTCGRGTTGTGGTGGAGTT
GGTGGTTGGGATTGGGTTTG
Alignments
Feature NameTypeLocationAnalysis
MDC008212.526 contig MDC008212.526:482..482. Malus x domestica Whole Genome v1.0 Assembly & Annotation