RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2, RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2
dbSNP IDss475880405
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2
50K SNP array for apple:AX-105212293
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAGGTTACTACTTTGTGACCAAAAGGTCATGGGTTC
3' Flanking SequenceAGTCGTGGAAACAGCCTCTTTGCAAAGCAAGGGG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201312N/A10.29RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2View
2Apple-M432-2013-physical-Malus-domestica12N/A5387988RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2View
Sequence
>RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2 ID=RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2; Name=RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
AGGTTACTACTTTGTGACCAAAAGGTCATGGGTTCRAGTCGTGGAAACAG
CCTCTTTGCAAAGCAAGGGG
Alignments
Feature NameTypeLocationAnalysis
MDC008128.327 contig MDC008128.327:4036..4036. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr12 chromosome Chr12:5627462..5627462. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation