RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2, RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2
dbSNP IDss475880565
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2
50K SNP array for apple:AX-105201390
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCGTAGTTTGTAAGTTATCGTTTACCGAGTTACACT
3' Flanking SequenceTAATAGTGTTGTTCGAAGTGTTATCAGTTGGAATG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20136N/A27.91RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2View
2Apple-M432-2013-physical-Malus-domestica12N/A31106692RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2View
3Apple-BB-F16N/A0.78RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2View
4Apple-NC-F16N/A0.64RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2View
5Apple-NCZFBB-consensus6N/A0.78RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2View
Sequence
>RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2 ID=RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2; Name=RosBREEDSNP_SNP_GA_31106692_Lg12_00915_MAF30_769120_exon2; organism=Malus x domestica; type=genetic_marker; length=71bp
CGTAGTTTGTAAGTTATCGTTTACCGAGTTACACTRTAATAGTGTTGTTC
GAAGTGTTATCAGTTGGAATG
Alignments
Feature NameTypeLocationAnalysis
MDC013883.428 contig MDC013883.428:4491..4491. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:393720..393720. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr06 chromosome Chr06:368569..368569. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation